The SERCOM bus clock (CLK_SERCOMx_APB) can be enabled and disabled in the Main Clock Controller. Refer to Peripheral Clock Masking for details and default status of this clock.
A generic clock (GCLK_SERCOMx_CORE) is required to clock the SPI. This clock must be configured and enabled in the Generic Clock Controller before using the SPI.
This generic clock is asynchronous to the bus clock (CLK_SERCOMx_APB). Therefore, writes to certain registers will require synchronization to the clock domains.