3.7 Using the Atmel JTAGICE mkII with Atmel STK600
The Atmel STK600 starter kit can be used to house Atmel AVR devices to which the Atmel JTAGICE mkII can connect through the JTAG, PDI, aWire, debugWIRE, and SPI interfaces.
When connecting to a JTAG target, simply connect the JTAGICE mkII probe to the inner JTAG pin header on the STK600.
When connecting to a PDI target, simply use the 6-pin 100mil adapter (provided) to connect to the SPI/PDI connector.
When connecting to a debugWIRE or SPI target, simply use the 10-pin to 6-pin 100mil ribbon cable (provided) to connect to the SPI/PDI connector.
When connecting to an aWire target, the 10-pin multicolored "squid" cable (provided) must be used to connect to the specified pinout. See section Connecting aWire.